Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004913.1 Corchorus capsularis cultivar CVL-1 contig04931, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17262

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13--52
5
8.4
5
89
10
66
22
20
0
57
1.41
13--47
18
1.9
18
100
0
70
22
20
0
57
1.41
13--56
23
1.9
23
100
0
88
22
20
0
56
1.42
216--262
19
2.4
21
82
13
64
29
2
2
65
1.15
886--935
23
2.2
23
85
0
64
32
14
8
46
1.73
896--942
23
2.0
23
100
0
94
25
12
12
48
1.77
944--969
8
3.2
8
100
0
52
50
0
23
26
1.50
1131--1311
93
1.9
93
86
0
254
26
20
11
40
1.87
2618--2651
12
2.8
13
86
13
54
41
0
55
2
1.15
8120--8203
24
3.5
24
81
15
111
59
2
0
38
1.10
8136--8230
27
3.3
29
70
18
81
55
2
0
42
1.11
8153--8230
36
2.2
35
82
11
88
57
2
0
39
1.12
14917--14968
25
2.0
26
89
10
81
17
30
11
40
1.85
15318--15376
27
2.2
27
93
0
100
6
23
8
61
1.49
15396--15442
24
1.9
25
95
4
87
51
10
10
27
1.70
16022--16051
15
2.1
14
93
6
51
50
10
6
33
1.62

Tables:   1

The End!