Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004916.1 Corchorus capsularis cultivar CVL-1 contig04934, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3236

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
214--284
31
2.2
32
82
7
83
29
14
4
52
1.60
249--462
105
2.0
106
95
0
385
35
12
1
50
1.50
890--927
19
2.0
20
85
15
53
28
5
2
63
1.30
1101--1216
46
2.6
44
78
8
117
32
7
19
39
1.81
1101--1216
22
5.2
22
73
8
63
32
7
19
39
1.81
1252--1621
22
16.7
21
70
16
144
39
9
16
34
1.81
1453--1643
44
4.4
44
74
5
165
42
9
14
34
1.77
1453--1646
88
2.2
87
80
4
203
42
9
14
34
1.78
1392--1618
66
3.4
65
76
9
167
41
9
15
33
1.80
1765--2302
22
24.7
22
70
13
202
39
10
15
35
1.80
2056--2171
45
2.6
44
78
6
119
30
9
18
41
1.83

Tables:   1

The End!