Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004918.1 Corchorus capsularis cultivar CVL-1 contig04936, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6436

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
645--690
23
2.0
23
91
8
76
28
23
13
34
1.92
698--732
5
7.0
5
87
12
54
20
0
0
80
0.72
1733--1856
33
3.7
33
80
8
135
7
26
41
25
1.81
2514--3002
104
4.6
103
77
9
400
36
11
7
44
1.69
2514--3002
108
4.6
106
78
10
432
36
11
7
44
1.69
3035--3117
26
3.2
26
67
16
82
45
12
7
34
1.69
3017--3121
51
2.1
51
100
0
210
45
11
7
35
1.69
6199--6232
2
17.0
2
100
0
68
50
0
0
50
1.00

Tables:   1

The End!