Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004921.1 Corchorus capsularis cultivar CVL-1 contig04939, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11905

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2499--2545
18
2.6
18
79
0
58
34
12
27
25
1.92
5358--5443
2
48.0
2
69
25
59
45
0
1
53
1.07
5358--5437
26
3.6
23
73
23
73
45
0
1
53
1.08
5358--5443
31
2.8
33
77
12
92
45
0
1
53
1.07
9103--9143
13
3.1
14
86
10
59
46
0
0
53
1.00
9101--9150
5
10.4
5
75
16
52
44
0
2
54
1.11
9461--9510
6
7.8
6
87
12
57
32
18
0
50
1.47
9461--9510
14
3.9
12
79
20
57
32
18
0
50
1.47

Tables:   1

The End!