Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004925.1 Corchorus capsularis cultivar CVL-1 contig04943, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8758

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6274--6309
1
36.0
1
100
0
72
100
0
0
0
0.00
7123--7263
60
2.3
60
85
2
203
24
16
22
36
1.94
7123--7285
60
2.7
60
81
3
202
25
16
20
36
1.94
7542--7604
31
2.0
31
84
6
83
33
0
4
61
1.17
7702--7741
20
2.0
21
90
5
64
37
0
5
57
1.21
7963--8010
24
2.0
24
95
0
87
41
0
22
35
1.54
8721--8755
2
17.5
2
100
0
70
51
0
0
48
1.00

Tables:   1

The End!