Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004930.1 Corchorus capsularis cultivar CVL-1 contig04948, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13803

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--66
2
32.5
2
96
3
123
1
48
0
50
1.10
4855--4895
18
2.4
17
84
8
55
58
2
29
9
1.43
6124--6153
14
2.1
14
93
0
51
3
20
0
76
0.92
6287--6328
20
2.1
20
100
0
84
40
26
9
23
1.85
11344--11385
16
2.7
15
92
7
66
28
28
16
26
1.97
13657--13688
2
16.0
2
100
0
64
50
0
0
50
1.00

Tables:   1

The End!