Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004931.1 Corchorus capsularis cultivar CVL-1 contig04949, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5086

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
400--694
109
2.7
109
89
5
423
50
2
11
36
1.50
2016--2172
74
2.1
74
91
4
255
40
8
29
21
1.82
3531--3597
30
2.2
30
81
10
82
23
20
13
41
1.88
3539--3605
30
2.2
32
86
7
95
22
14
14
47
1.81
3749--3852
28
3.6
29
84
10
140
44
14
12
28
1.82
3759--3859
31
3.3
31
82
9
136
46
12
11
28
1.78

Tables:   1

The End!