Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004934.1 Corchorus capsularis cultivar CVL-1 contig04952, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14174

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--41
2
20.5
2
100
0
82
48
0
0
51
1.00
1904--1928
2
12.5
2
100
0
50
52
0
0
48
1.00
2769--2806
18
2.1
19
95
5
69
71
0
28
0
0.87
2769--2806
19
2.0
19
94
0
67
71
0
28
0
0.87
2760--2800
16
2.7
16
85
7
59
73
0
26
0
0.84
5970--6014
22
2.0
22
100
0
90
35
8
46
8
1.66
11522--11587
21
3.0
22
80
14
91
33
4
24
37
1.76
11515--11581
21
3.2
20
82
14
89
32
4
25
37
1.76
12563--12634
29
2.4
29
81
2
81
38
26
11
23
1.88

Tables:   1

The End!