Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004935.1 Corchorus capsularis cultivar CVL-1 contig04953, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15017

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10673--10699
3
9.0
3
100
0
54
0
33
0
66
0.92
14395--14542
40
3.8
40
83
4
167
15
20
34
29
1.93
14395--14671
40
6.7
40
73
19
160
14
19
35
30
1.92
14579--14671
37
2.5
38
94
1
161
15
19
35
30
1.92
14488--14764
130
2.1
131
95
0
502
15
20
34
29
1.94
14678--14766
38
2.2
38
80
11
99
16
20
34
28
1.94
14616--14819
93
2.2
93
98
0
390
16
21
34
27
1.94
14747--14876
55
2.4
55
98
0
251
17
20
34
26
1.95
14876--15017
38
3.7
38
96
0
248
13
20
37
28
1.90

Tables:   1

The End!