Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004941.1 Corchorus capsularis cultivar CVL-1 contig04959, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9718

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
216--265
21
2.4
21
77
9
59
36
0
0
64
0.94
1457--1491
12
2.9
12
91
0
52
0
40
0
60
0.97
4670--4756
31
2.9
31
84
3
115
27
22
14
34
1.94
5418--5467
24
2.1
23
85
3
64
14
36
10
40
1.79
5587--5680
32
2.8
33
85
7
129
15
32
35
15
1.90
7328--7370
2
22.0
2
85
4
61
46
2
2
48
1.27
8247--8287
20
2.0
21
90
4
66
80
7
0
12
0.90
8380--8460
29
2.7
31
84
3
103
35
14
23
25
1.93

Tables:   1

The End!