Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004942.1 Corchorus capsularis cultivar CVL-1 contig04960, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7322

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
318--365
24
2.0
24
100
0
96
41
0
25
33
1.55
2240--2273
15
2.3
15
100
0
68
41
11
0
47
1.40
2344--2388
14
3.2
14
85
14
58
46
2
0
51
1.13
2838--3047
22
9.5
21
73
8
141
36
8
17
38
1.80
2869--2961
44
2.1
44
94
4
161
34
11
19
34
1.88
2834--3047
112
1.9
110
83
5
279
35
8
17
38
1.80
3138--3197
21
2.8
22
84
5
95
26
8
13
51
1.69
3137--3442
22
13.9
22
67
16
77
38
9
16
36
1.80
3235--3440
44
4.8
45
69
21
120
41
9
16
33
1.80
3317--3486
22
7.7
22
74
7
112
40
10
14
35
1.79
3992--4463
22
21.7
22
65
17
73
40
8
15
35
1.79
4113--4238
22
5.7
21
78
7
99
39
7
13
38
1.74
4359--4403
21
2.0
23
87
8
67
51
4
11
33
1.58
5279--5568
146
2.0
149
86
4
408
34
9
3
52
1.50

Tables:   1

The End!