Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004943.1 Corchorus capsularis cultivar CVL-1 contig04961, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6141

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
431--491
23
2.7
23
85
7
79
55
1
0
42
1.09
435--576
19
7.4
19
67
21
82
52
2
0
44
1.17
485--576
28
3.3
26
77
15
94
51
2
1
45
1.20
508--543
16
2.2
16
90
0
54
47
2
0
50
1.15
477--573
14
6.8
13
73
13
68
51
2
1
45
1.19
2621--2671
14
3.8
13
77
12
50
43
0
0
56
0.99
2648--2698
26
1.9
26
84
4
66
47
1
1
49
1.24
5877--5924
2
24.0
2
95
0
87
50
2
0
47
1.12

Tables:   1

The End!