Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004944.1 Corchorus capsularis cultivar CVL-1 contig04962, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27207

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6210--6247
16
2.6
14
81
18
51
10
31
7
50
1.66
7695--7786
46
2.0
46
91
4
152
41
9
13
35
1.77
9173--9203
1
31.0
1
93
0
53
0
3
0
96
0.21
12606--12631
1
26.0
1
100
0
52
100
0
0
0
0.00
20052--20088
19
1.9
19
88
0
56
32
16
13
37
1.87
26841--26886
22
2.1
22
84
11
60
17
34
10
36
1.85
27072--27199
33
3.9
33
79
4
143
16
35
33
14
1.90
27072--27190
34
3.6
34
85
3
118
15
35
32
15
1.90

Tables:   1

The End!