Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004948.1 Corchorus capsularis cultivar CVL-1 contig04966, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6607

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--29
2
14.5
2
100
0
58
51
0
0
48
1.00
1402--1476
16
4.8
16
76
3
80
41
40
10
8
1.69
1402--1476
31
2.4
32
81
2
89
41
40
10
8
1.69
1725--1751
7
3.9
7
100
0
54
44
0
25
29
1.54
2503--2542
11
3.8
11
90
9
57
45
0
5
50
1.23
6286--6322
2
19.0
2
94
5
67
51
0
0
48
1.00

Tables:   1

The End!