Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004949.1 Corchorus capsularis cultivar CVL-1 contig04967, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14828

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
336--428
11
7.1
14
65
22
58
33
2
8
55
1.42
367--434
26
2.6
26
86
9
102
33
1
10
54
1.43
443--502
25
2.5
25
86
5
79
43
0
20
36
1.52
2828--2892
33
2.0
33
81
6
78
50
3
40
6
1.43
5724--5806
42
2.0
43
88
7
125
22
18
24
34
1.96
5794--5836
20
2.1
21
86
4
61
39
20
18
20
1.93

Tables:   1

The End!