Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004956.1 Corchorus capsularis cultivar CVL-1 contig04974, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1318

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
104--147
21
2.1
21
86
0
61
38
11
27
22
1.88
298--325
2
14.0
2
100
0
56
50
0
0
50
1.00
621--706
45
1.9
45
83
4
111
38
15
11
34
1.83
590--1068
22
22.0
22
69
13
174
36
15
10
38
1.81
758--861
23
4.6
23
81
1
104
39
15
8
36
1.78
758--861
46
2.3
45
83
6
122
39
15
8
36
1.78
1173--1305
22
5.8
22
70
15
83
33
15
9
42
1.78

Tables:   1

The End!