Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004957.1 Corchorus capsularis cultivar CVL-1 contig04975, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5538

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
98--128
2
15.0
2
93
6
53
48
0
3
48
1.17
454--478
2
12.5
2
100
0
50
52
0
0
48
1.00
1826--1855
6
4.8
6
92
8
51
70
0
0
30
0.88
1825--1854
13
2.3
13
100
0
60
73
0
0
26
0.84
1866--2133
138
2.0
130
92
5
446
37
16
10
34
1.84
2919--2957
19
2.1
19
95
0
69
48
38
12
0
1.42
3563--3638
28
2.6
30
89
6
111
26
26
14
32
1.94
4333--4390
29
2.0
29
96
0
107
44
15
17
22
1.86

Tables:   1

The End!