Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004965.1 Corchorus capsularis cultivar CVL-1 contig04983, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8043

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
191--240
9
5.6
9
85
0
73
40
4
14
42
1.64
459--491
17
1.9
17
100
0
66
42
18
6
33
1.75
2203--2277
36
2.1
36
89
0
114
18
36
13
32
1.90
2217--2281
18
3.6
18
71
8
69
16
38
12
32
1.86
2248--2292
18
2.5
17
82
10
54
11
46
11
31
1.74
2417--2460
18
2.4
18
84
0
61
59
13
0
27
1.35
2487--2524
7
5.4
7
87
0
58
55
10
0
34
1.34
8003--8043
2
20.5
2
100
0
82
51
0
0
48
1.00

Tables:   1

The End!