Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004970.1 Corchorus capsularis cultivar CVL-1 contig04988, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8816

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
736--785
25
2.0
25
84
11
66
52
2
8
38
1.43
938--1207
133
2.0
133
100
0
540
45
5
11
37
1.64
1552--1579
13
2.2
13
100
0
56
7
14
21
57
1.61
3954--3986
16
2.1
16
94
0
57
51
27
12
9
1.69
4202--4251
16
3.2
15
80
8
64
38
38
10
14
1.79
4209--4268
15
3.9
16
76
6
61
36
35
8
20
1.82
4201--4271
31
2.3
31
92
2
115
36
36
9
16
1.82
7964--8143
54
3.4
54
85
4
258
38
26
14
20
1.91
8098--8199
30
3.4
30
76
10
100
39
29
12
18
1.88

Tables:   1

The End!