Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: AWWV01004971.1 Corchorus capsularis cultivar CVL-1 contig04989, whole genome shotgun sequence Parameters: 2 7 7 80 10 50 1000 Length: 4294

Tables:   1   

This is table  1  of  1  ( 3 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3699--3807
54
2.0
54
98
0
209
29
10
12
47
1.74
3710--3822
54
2.1
54
91
0
181
31
8
11
47
1.70
3868--3991
61
2.0
61
100
0
248
38
16
4
40
1.69

Tables:   1   

The End!