Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004991.1 Corchorus capsularis cultivar CVL-1 contig05009, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10524

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4829--4876
25
1.9
25
86
0
69
43
18
8
29
1.79
8472--8566
33
2.9
32
78
7
102
12
33
41
12
1.81
8537--8624
33
2.7
33
89
3
124
11
31
39
17
1.85
8547--8599
16
3.2
16
70
15
54
7
28
45
18
1.77
9957--9991
14
2.5
14
85
0
52
80
0
14
5
0.89

Tables:   1

The End!