Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004992.1 Corchorus capsularis cultivar CVL-1 contig05010, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12936

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
306--364
31
1.9
31
89
6
93
50
3
15
30
1.60
3515--4185
343
2.0
342
86
4
958
37
8
13
39
1.77
4887--4971
40
2.1
42
88
4
129
28
12
20
38
1.89
6199--6238
2
20.0
2
94
0
71
50
2
0
47
1.14
9356--9381
12
2.2
12
100
0
52
92
0
7
0
0.39
10341--10380
20
2.0
20
95
0
71
22
17
30
30
1.97

Tables:   1

The End!