Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01004996.1 Corchorus capsularis cultivar CVL-1 contig05014, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8718

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
106--174
35
2.0
35
82
5
86
36
13
10
40
1.78
296--380
22
3.8
23
76
11
88
37
16
9
36
1.81
2896--2947
25
2.1
25
100
0
104
26
23
23
26
2.00
4890--4942
24
2.2
24
96
0
97
33
7
20
37
1.81
4890--4929
14
3.1
14
73
26
52
35
10
20
35
1.86
6914--6943
8
3.6
8
91
8
51
40
10
0
50
1.36
6914--6956
17
2.4
18
92
7
70
39
11
0
48
1.40
6912--6957
19
2.4
19
85
0
65
41
10
0
47
1.38
7818--7855
20
1.9
20
94
0
67
47
15
2
34
1.60

Tables:   1

The End!