Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005003.1 Corchorus capsularis cultivar CVL-1 contig05021, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17115

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56--201
48
2.9
51
76
14
149
38
8
19
33
1.83
634--681
22
2.3
20
86
10
62
39
25
16
18
1.91
601--703
53
1.9
53
90
0
161
35
27
20
16
1.94
653--750
31
3.2
31
83
0
115
33
27
20
18
1.96
1566--1627
27
2.3
26
83
8
79
16
37
14
32
1.89
2371--2401
2
15.5
2
100
0
62
48
0
0
51
1.00
17068--17104
2
18.5
2
100
0
74
51
0
0
48
1.00

Tables:   1

The End!