Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005006.1 Corchorus capsularis cultivar CVL-1 contig05024, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33255

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4775--4818
18
2.4
18
85
7
54
52
2
27
18
1.57
7138--7172
1
35.0
1
100
0
70
100
0
0
0
0.00
10215--10239
3
8.3
3
100
0
50
32
0
0
68
0.90
10993--11096
52
2.0
52
100
0
208
21
28
11
38
1.88
11007--11118
52
2.2
52
87
6
156
24
29
11
34
1.90
12139--12192
27
2.0
27
85
0
72
18
25
29
25
1.98
26128--26182
17
3.4
17
66
19
53
58
12
14
14
1.64
26118--26183
32
2.1
32
100
0
132
56
13
15
15
1.69
26556--26585
15
2.0
15
100
0
60
73
0
20
6
1.05
30857--30910
15
3.6
14
85
5
63
29
1
35
33
1.69
30875--30921
24
1.9
25
86
4
69
34
2
34
29
1.70

Tables:   1

The End!