Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005007.1 Corchorus capsularis cultivar CVL-1 contig05025, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24026

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--63
33
1.9
33
86
3
90
12
37
38
11
1.80
63--141
33
2.4
33
89
4
115
12
27
40
18
1.87
817--1380
22
25.9
21
70
14
279
36
15
9
37
1.81
1124--1208
23
3.7
23
81
7
93
37
12
7
42
1.71
1117--1208
46
2.0
45
85
2
121
36
15
7
40
1.76
1152--1269
60
2.0
61
83
5
150
34
15
8
41
1.77
2692--2787
38
2.6
37
80
6
122
55
10
18
15
1.68
2911--2975
31
2.1
31
85
5
87
46
3
18
32
1.65
5306--6345
317
3.2
327
78
9
927
37
15
14
33
1.87
20564--20598
1
35.0
1
100
0
70
100
0
0
0
0.00

Tables:   1

The End!