Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005008.1 Corchorus capsularis cultivar CVL-1 contig05026, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6424

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28--102
32
2.3
32
90
0
114
12
45
33
9
1.73
918--949
17
1.9
17
93
6
57
31
9
15
43
1.78
1549--1607
29
2.0
31
83
12
79
44
6
0
49
1.29
1545--1614
30
2.3
29
80
9
79
42
5
0
51
1.25
2868--3162
109
2.7
109
91
4
448
49
2
11
36
1.51
4008--4106
50
2.0
50
100
0
198
54
2
8
35
1.41
5545--5574
16
1.9
15
93
6
51
90
0
10
0
0.47

Tables:   1

The End!