Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005012.1 Corchorus capsularis cultivar CVL-1 contig05030, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15812

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3075--3134
29
2.1
29
100
0
120
26
10
30
33
1.89
3172--3209
18
2.1
18
100
0
76
15
5
21
57
1.57
4346--4373
2
14.0
2
100
0
56
50
0
0
50
1.00
11119--11171
26
2.0
26
96
0
97
28
16
11
43
1.83
11180--11283
51
2.0
51
98
0
199
38
30
4
25
1.77
13622--13652
2
15.5
2
100
0
62
51
0
0
48
1.00
14072--14098
7
3.9
7
100
0
54
14
25
29
29
1.95

Tables:   1

The End!