Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005016.1 Corchorus capsularis cultivar CVL-1 contig05034, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3004

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2634--2775
35
4.0
35
79
9
164
19
21
2
56
1.53
2679--2811
7
19.1
7
66
18
55
20
22
2
54
1.55
2656--2810
69
2.2
71
77
11
167
20
21
1
56
1.52
2892--2991
26
3.8
26
85
10
148
17
19
7
57
1.62
2923--2980
16
3.9
15
76
21
59
17
20
6
55
1.65
2891--3001
54
2.1
54
96
0
204
15
18
8
57
1.62

Tables:   1

The End!