Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005022.1 Corchorus capsularis cultivar CVL-1 contig05040, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9468

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2485--2514
15
2.0
15
93
0
51
43
13
16
26
1.85
2646--2696
24
2.1
24
96
0
93
27
19
15
37
1.92
2710--2775
34
1.9
34
100
0
132
40
16
9
33
1.80
5621--5859
78
3.2
77
89
7
350
49
0
12
36
1.47
5627--5859
70
3.2
71
84
10
301
49
0
12
36
1.47
8972--9045
31
2.5
30
84
4
96
28
28
16
27
1.97
8972--9045
30
2.4
30
84
8
96
28
28
16
27
1.97

Tables:   1

The End!