Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005026.1 Corchorus capsularis cultivar CVL-1 contig05044, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4645

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
275--303
9
3.0
10
90
10
51
31
0
0
68
0.89
275--314
19
2.2
18
86
4
53
27
5
0
67
1.11
958--1006
24
2.0
24
100
0
98
20
24
10
44
1.82
1115--1246
66
2.0
66
95
0
237
33
15
21
29
1.94
1503--1618
57
2.0
57
94
0
205
38
25
8
27
1.85
3556--3583
14
2.0
14
100
0
56
42
21
14
21
1.88

Tables:   1

The End!