Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005050.1 Corchorus capsularis cultivar CVL-1 contig05068, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20960

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
728--765
11
3.5
11
85
10
51
57
2
0
39
1.12
1079--1171
48
1.9
48
97
0
177
45
6
6
41
1.55
2658--2884
107
2.1
107
89
0
337
42
8
7
41
1.63
2658--2926
107
2.5
107
84
2
308
42
9
6
41
1.63
3524--3572
25
2.0
25
95
0
89
40
14
2
42
1.57
14992--15019
3
9.3
3
100
0
56
35
32
0
32
1.58
15310--15403
28
3.6
29
65
25
82
32
12
29
24
1.92
15312--15408
49
2.0
49
100
0
194
32
14
28
23
1.94
20715--20759
21
2.1
21
87
0
63
17
33
11
37
1.85

Tables:   1

The End!