Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005055.1 Corchorus capsularis cultivar CVL-1 contig05073, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25092

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
163--235
2
41.5
2
70
24
58
45
0
1
53
1.09
161--221
31
2.0
30
93
3
104
45
0
1
52
1.10
159--237
21
3.8
20
82
14
97
45
0
1
53
1.08
322--353
8
4.0
8
100
0
64
37
37
12
12
1.81
7094--7120
14
1.9
14
100
0
54
37
0
0
62
0.95
12246--12289
21
2.1
21
83
8
54
18
31
9
40
1.81
17048--17073
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!