Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005056.1 Corchorus capsularis cultivar CVL-1 contig05074, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38575

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
80--748
327
2.0
323
82
6
787
36
15
14
33
1.88
2863--2998
68
2.0
68
89
2
211
40
20
11
27
1.87
3301--3326
13
2.0
13
100
0
52
53
0
0
46
1.00
6040--6077
2
19.5
2
89
5
60
47
2
0
50
1.15
23451--23482
14
2.2
15
94
5
57
37
0
62
0
0.95
27983--28094
55
2.0
55
96
0
206
36
19
17
25
1.94
31182--31288
53
2.0
53
92
0
178
41
6
11
41
1.67
32212--32251
14
2.7
14
88
7
53
12
5
35
47
1.63

Tables:   1

The End!