Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000506.1 Corchorus capsularis cultivar CVL-1 contig00506, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1028

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
425--505
40
2.2
36
78
21
96
50
3
23
22
1.65
565--652
32
3.1
26
75
16
86
52
5
17
25
1.66
550--632
32
2.5
33
83
13
116
53
4
18
24
1.64
606--658
26
2.1
26
89
10
83
52
3
15
28
1.59
654--804
14
10.9
14
70
17
84
52
6
22
18
1.68
646--724
28
2.8
27
85
12
106
55
3
21
18
1.58
674--756
43
1.9
44
90
4
134
54
6
21
18
1.65
649--741
28
3.3
27
80
14
98
55
5
20
18
1.61
936--1004
22
3.2
22
81
2
86
50
4
23
21
1.66

Tables:   1

The End!