Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005062.1 Corchorus capsularis cultivar CVL-1 contig05080, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14124

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2771--2813
22
2.0
22
90
0
68
34
9
16
39
1.80
2978--3061
22
3.8
21
74
12
71
39
9
14
36
1.78
3148--3246
51
2.0
49
82
11
121
32
10
15
42
1.80
3869--3946
31
2.5
31
93
0
129
28
29
24
17
1.98
3877--3954
31
2.5
31
78
12
88
34
29
19
16
1.94
5770--5817
18
2.7
17
87
12
62
31
4
4
60
1.35
5787--5840
25
2.1
26
86
10
76
38
0
1
59
1.08
5792--5837
21
2.2
20
81
11
56
39
0
2
58
1.10
6244--6268
2
12.5
2
100
0
50
48
0
0
52
1.00
14080--14124
13
3.4
14
85
11
60
46
2
0
51
1.13
14088--14124
15
2.4
16
82
13
51
43
2
0
54
1.14

Tables:   1

The End!