Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005065.1 Corchorus capsularis cultivar CVL-1 contig05083, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9562

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
165--496
154
2.2
150
87
4
470
38
11
9
40
1.73
5718--5747
12
2.6
11
90
10
51
0
0
10
90
0.47
6325--6354
13
2.3
13
94
0
51
86
0
3
10
0.67
8734--8770
15
2.3
17
81
13
51
16
0
18
64
1.29
8737--8770
16
2.2
16
89
5
52
14
0
17
67
1.23
9379--9432
2
26.0
2
92
7
90
48
0
3
48
1.19
9379--9432
27
2.0
27
100
0
108
48
0
3
48
1.19
9387--9443
13
4.5
13
85
8
55
47
1
5
45
1.35

Tables:   1

The End!