Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005066.1 Corchorus capsularis cultivar CVL-1 contig05084, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6421

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13--57
23
1.9
24
86
4
65
53
2
8
35
1.45
2100--2167
29
2.3
29
80
5
75
38
16
29
16
1.90
2114--2175
28
2.2
29
79
2
72
38
19
24
17
1.93
3426--3459
4
8.8
4
87
6
52
70
0
29
0
0.87
5021--5062
22
1.9
22
85
9
59
30
0
2
66
1.04
5446--5476
1
31.0
1
93
0
53
96
0
0
3
0.21

Tables:   1

The End!