Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005077.1 Corchorus capsularis cultivar CVL-1 contig05095, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6762

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
964--1038
27
2.8
27
89
0
114
36
24
18
21
1.95
1429--1462
18
1.9
17
88
5
50
47
8
17
26
1.77
1420--1529
51
2.2
50
90
4
168
42
12
20
24
1.86
1469--1785
64
4.9
64
94
1
539
44
14
18
22
1.86
1608--1642
18
1.9
18
88
11
54
54
5
14
25
1.62
1672--1706
18
1.9
18
88
11
54
54
5
14
25
1.62
1725--2415
52
12.0
52
72
22
428
44
13
17
24
1.84
1777--1902
65
2.0
64
90
1
198
43
15
14
26
1.85
1661--2471
230
3.5
229
84
11
1022
44
13
18
24
1.85
2196--2230
18
1.9
18
88
11
54
54
5
14
25
1.62
2059--2375
65
5.0
64
89
3
496
42
13
18
24
1.87
2059--2375
127
2.5
128
90
5
500
42
13
18
24
1.87
2315--2416
51
2.0
51
92
0
168
44
10
19
25
1.83
1533--2471
473
2.0
464
88
6
1379
44
13
18
23
1.85
2660--2895
113
2.1
113
98
0
454
27
24
13
34
1.93

Tables:   1

The End!