Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005078.1 Corchorus capsularis cultivar CVL-1 contig05096, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9412

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5582--5660
41
2.0
41
87
2
115
37
6
11
44
1.66
5684--5748
29
2.2
29
84
10
87
44
1
16
36
1.58
5696--5761
29
2.2
29
89
2
96
42
0
15
42
1.46
5783--6197
51
8.4
51
70
15
259
43
6
15
35
1.72
5925--5968
21
2.1
21
87
8
63
47
6
11
34
1.66
5780--6157
140
2.6
145
86
7
511
43
6
15
34
1.73
6013--6245
101
2.3
101
81
8
242
41
6
15
36
1.74
5923--6289
51
7.3
52
77
9
266
42
6
15
35
1.73
6070--6291
101
2.2
100
82
7
265
41
5
15
36
1.72
6841--7991
49
23.2
49
82
6
1087
17
26
16
38
1.91
6812--7990
99
11.9
99
75
12
355
17
26
16
38
1.92
8722--8802
27
3.0
27
85
0
99
20
19
20
38
1.94

Tables:   1

The End!