Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005087.1 Corchorus capsularis cultivar CVL-1 contig05105, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4022

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
659--698
19
2.1
19
100
0
80
52
5
32
10
1.56
1698--1723
1
26.0
1
100
0
52
100
0
0
0
0.00
1782--1855
31
2.4
30
82
4
94
32
24
18
24
1.97
1862--1918
16
3.5
16
72
13
53
28
7
22
42
1.80
1846--1930
33
2.5
33
82
1
107
28
12
22
36
1.91
2410--2434
12
2.1
12
100
0
50
24
40
0
36
1.55
2586--2684
50
2.0
50
91
0
162
41
5
9
44
1.58
3545--3577
17
1.9
17
93
0
57
18
18
6
57
1.60

Tables:   1

The End!