Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005089.1 Corchorus capsularis cultivar CVL-1 contig05107, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14761

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4017--4054
11
3.5
11
85
10
51
57
2
0
39
1.12
4359--4545
102
1.8
103
84
3
261
40
13
13
32
1.85
5034--5071
11
3.5
11
85
10
51
57
2
0
39
1.12
6619--6663
2
24.5
2
82
17
62
44
0
0
55
0.99
6609--6663
24
2.4
24
90
6
87
45
0
1
52
1.11
6617--6664
16
3.2
16
88
11
75
43
0
0
56
0.99
7543--7585
22
1.9
23
95
4
79
46
0
2
51
1.13
8120--8471
184
1.9
183
80
8
410
34
14
17
32
1.91
8826--8878
17
3.1
17
76
10
63
26
37
15
20
1.92
13305--13355
15
3.4
15
80
0
57
17
21
23
37
1.94
13296--13354
30
2.0
30
86
0
82
18
23
23
33
1.97

Tables:   1

The End!