Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005092.1 Corchorus capsularis cultivar CVL-1 contig05110, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6466

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2512--2569
14
4.3
13
80
8
62
41
6
12
39
1.69
2511--2569
28
2.1
27
81
9
75
40
6
11
40
1.68
3087--3119
5
6.6
5
100
0
66
81
0
18
0
0.68
3652--3691
20
2.0
21
90
9
66
45
5
15
35
1.68
5078--5307
64
3.6
64
85
1
318
33
13
26
26
1.93
5551--5634
27
3.3
27
65
19
79
34
11
29
23
1.91
5678--5760
23
3.4
23
69
18
69
38
12
31
18
1.87
5901--5987
27
3.4
27
69
23
87
39
12
25
22
1.90
5520--5985
50
9.3
50
93
0
770
37
11
28
22
1.89
6244--6318
27
2.8
27
85
0
105
16
16
26
41
1.88

Tables:   1

The End!