Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005095.1 Corchorus capsularis cultivar CVL-1 contig05113, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10636

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
680--705
12
2.2
12
100
0
52
26
23
0
50
1.50
4023--4066
23
1.9
23
100
0
88
47
6
9
36
1.62
4692--4723
15
2.1
15
94
0
55
59
12
0
28
1.34
6308--6375
19
3.7
19
79
11
79
50
0
0
50
1.00
8347--9953
667
2.4
658
85
5
2166
37
15
13
32
1.87

Tables:   1

The End!