Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005103.1 Corchorus capsularis cultivar CVL-1 contig05121, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8679

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3479--3562
32
2.6
32
94
0
141
15
42
28
13
1.84
3740--3872
32
4.1
32
83
5
169
12
39
39
9
1.75
3752--3888
65
2.1
64
85
4
177
11
36
40
10
1.77
3752--3888
32
4.2
32
79
7
143
11
36
40
10
1.77
4360--4401
20
2.1
20
100
0
84
30
14
19
35
1.91
7652--7676
2
12.5
2
100
0
50
48
0
0
52
1.00
7747--7791
6
7.7
6
77
22
51
33
17
0
48
1.48
7754--7780
10
2.7
10
100
0
54
29
18
0
51
1.46
8477--8526
25
2.0
25
100
0
100
12
12
32
44
1.78

Tables:   1

The End!