Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005104.1 Corchorus capsularis cultivar CVL-1 contig05122, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22728

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
345--386
20
2.1
21
86
8
61
28
7
7
57
1.52
7812--7876
20
3.2
20
87
10
89
58
13
6
21
1.57
7819--7879
20
3.0
20
90
4
104
57
16
4
21
1.58
7819--7882
21
3.1
21
93
2
112
57
17
4
20
1.57
17125--17245
22
5.7
22
77
13
146
51
0
4
44
1.20
17125--17249
11
11.8
11
72
8
89
52
0
4
44
1.20
21593--21656
27
2.3
27
94
2
110
56
7
26
9
1.58

Tables:   1

The End!