Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005106.1 Corchorus capsularis cultivar CVL-1 contig05124, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5882

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1440--1668
85
2.7
84
90
3
354
39
16
5
38
1.71
1954--1984
2
16.0
2
93
6
55
51
0
0
48
1.00
2794--3122
35
9.4
35
86
0
417
35
17
18
28
1.94
3104--3558
35
12.9
35
90
0
669
32
23
14
29
1.94
2794--3555
105
7.2
107
81
8
505
34
20
16
28
1.94

Tables:   1

The End!