Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005108.1 Corchorus capsularis cultivar CVL-1 contig05126, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24264

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2175--2250
35
2.3
34
86
6
102
21
6
32
39
1.79
2210--2251
17
2.6
16
81
7
50
19
4
33
42
1.72
4219--4280
31
2.0
32
87
9
92
19
14
11
54
1.69
17044--17075
6
5.3
6
100
0
64
31
0
0
68
0.90
18374--18400
14
1.9
14
100
0
54
0
11
0
88
0.50
19384--19408
11
2.3
11
100
0
50
72
0
28
0
0.86
20052--20274
115
1.9
115
96
0
410
39
8
13
39
1.73

Tables:   1

The End!