Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005111.1 Corchorus capsularis cultivar CVL-1 contig05129, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9080

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1016--1098
42
2.0
43
85
7
116
22
16
24
36
1.95
1268--1295
14
2.0
14
100
0
56
50
0
0
50
1.00
1610--1662
26
2.0
27
82
10
65
50
5
1
41
1.36
1590--1749
80
2.0
81
98
1
313
42
7
7
42
1.61
4234--4272
3
13.0
3
100
0
78
66
0
33
0
0.92
4898--4954
25
2.2
25
81
6
69
59
1
0
38
1.08
7102--7128
2
13.5
2
100
0
54
51
48
0
0
1.00
7128--7153
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!