Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005113.1 Corchorus capsularis cultivar CVL-1 contig05131, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11450

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2504--2563
31
2.0
29
90
6
93
45
8
18
28
1.78
2499--2709
70
3.0
70
78
6
230
41
12
20
25
1.87
2680--3235
41
13.5
41
92
0
869
42
11
18
26
1.84
3213--3616
37
10.9
36
88
4
520
45
9
19
25
1.80
3630--3881
41
6.5
40
73
12
229
45
11
19
23
1.82
3632--3836
76
2.7
76
93
1
349
46
10
18
24
1.80
3988--4438
37
12.3
37
85
5
578
39
7
29
23
1.81
4208--4268
18
3.3
18
69
13
61
44
3
31
21
1.68
4420--4454
18
1.9
18
88
0
52
45
8
20
25
1.79
4445--4602
36
4.3
36
82
10
194
40
10
21
27
1.86
4449--4593
38
3.9
38
92
2
233
40
10
21
27
1.85
4449--4593
74
1.9
74
92
1
245
40
10
21
27
1.85
11199--11233
13
2.7
13
95
0
61
60
8
11
20
1.57

Tables:   1

The End!